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Survival-associated eQTLs across different cancer types


We identified 22,212 eQTLs associated with patient overall survival across different cancer types at FDR < 0.05.


e.g., "STAD"
e.g., "rs1824937"


Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
log-rank test p-value
Sample size
Median survival time AA
Median survival time Aa
Median survival time aa
Dispaly
THCA rs12190928 chr6:86737826 T/A 9.1E-15 478 15.07 19.95 11.42 KM Plot
THCA rs12201016 chr6:90149275 C/T 0.000229 490 19.73 16.38 15.63 KM Plot
THCA rs12202555 chr6:153320206 C/T 4.33E-5 489 15.2 17.83 10.45 KM Plot
THCA rs12203295 chr6:47548323 A/G 0.000315 490 15.63 20.5 12.4 KM Plot
THCA rs12204026 chr6:153326211 G/A 1.48E-6 482 15.67 16.47 33.97 KM Plot
THCA rs12204160 chr6:86760377 T/G 9.88E-15 482 15 19 11.42 KM Plot
THCA rs12204251 chr6:153334129 A/G 4.38E-5 488 15.17 17.82 10.45 KM Plot
THCA rs12209718 chr6:153329260 G/A 4.31E-5 490 15.17 17.83 10.45 KM Plot
THCA rs12210184 chr6:153291031 T/G 0 489 15.17 18.32 6.92 KM Plot
THCA rs12215363 chr6:153307949 G/A 4.66E-5 480 15.13 17.93 10.45 KM Plot
THCA rs12215741 chr6:90154845 G/A 0.000229 488 15.63 16.4 22.72 KM Plot
THCA rs12216637 chr7:44335155 A/T 9.92E-6 490 15.9 16.07 12.7 KM Plot
THCA rs12217507 chr10:90922828 G/A 0.000311 482 15.33 17.85 14.47 KM Plot
THCA rs12228521 chr12:49294100 A/G 0.000313 485 16.8 16.2 13.93 KM Plot
THCA rs12232379 chr16:20777031 C/T 4.8E-5 490 16.37 14.67 17.47 KM Plot